BNFO 301 
Introduction to Bioinformatics
Questionnaire on: Fuller et al (1984)
(please press SUBMIT button when finished)
(If you encounter a question you've answered in a previous questionnaire and nothing has changed, just skip over it)
Spring 2014 


I. Basic Information

A. Your name 
II. Old Business
Problem Set 1

A. Your thoughts on Problem 2 (length of human genome)?
   

B. Your thoughts on Problem 8 (algorithm to make complementary DNA strand)?
   

C. Your thoughts on Problem 3 (frequency of CCCGGG in Prochlorococcus)?
   

D. Your thoughts on Problem 4 (Fig. 2 from Nakamura & Inouye)?
   

Getting used to BioBIKE

E. Any areas you think would be useful to discuss?
   

What is a Gene?

F. How far have you gotten in the tutorial, "What is a Gene?"?
    You can answer by referring to the last item you addressed (e.g. III.3). 

G. Provide a statement that describes as accurately and completely as possible your current understanding regarding how a cell determines where a gene begins.
   

H. Anything we should talk about?
   

III. Fuller et al (1984)

A. How far have you gotten in this article (and its companion)?
   

Consider how comfortable you are with the following topics regarding these matters:

B. The question you are directing at this article and the biology behind the question

C. The relationship (or possible relationship between DNA replication, DnaA protein, and the 9-basepair sequence

D. The process of skimming an article to decide what part of it to read

E. The nature of M13oriC26 RFI

F. Restriction of M13oriC26 by TaqI and the nature of Fig. 1

G. The filter binding experiment

H. How to understand Fig. 2A

   

Choose up to six questions that you would most like discussed in class:

SQ1  SQ2 SQ3 SQ4 SQ5 SQ6 SQ7  SQ8  SQ9 
SQ10 SQ11 SQ12 SQ13  SQ14 SQ15 SQ16 SQ17 
SQ18  SQ19 SQ20 SQ21 SQ22 
And from the special help on restriction digestion of M13:
SQR1  SQR2 SQR3 SQR4 SQR5 SQR6
V. Miscellaneous
Any other comments, questions, suggestions, or concerns you may have?

Thanks!

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