Very small mobile repeated elements in cyanobacterial genomes

Jeff Elhai,1 Michiko Kato,1 Sarah Cousins,1 Peter Lindblad,2 José Luis Costa2
1Center for the Study of Biological Complexity, Virginia Commonwealth University, Richmond, VA, U.S.A.
2
Department of Physiological Botany, Evolutionary Biology Centre, Uppsala University, Villavägen 6, Sweden

Genome Research (2008) 18:1472-1499
 

Abstract (HTML)

 

Full article (PDF; preprint, as accepted for publication)

 

Supplementary Material

   Suppl. Fig. 1: Sequences and contexts of SDR1 elements

   Suppl. Fig. 2a: Sequences and contexts of SDR2a elements (copy number >= 3)

   Suppl. Fig. 2b: Sequences and contexts of SDR2b elements

   Suppl. Fig. 3: Sequences and context of SDR3 elements

   Suppl. Fig. 4: Sequences and context of SDR4 (copy number ≥ 3)

   Suppl. Fig. 5: Sequences and context of SDR5 elements

   Suppl. Fig. 6: Sequences and context of SDR6 elements

   Suppl. Fig. 7: Sequences and context of SDR7 elements

   Suppl. Fig. 8: Sequences and context of SDR8 elements and related sequences

   Suppl. Fig. 9: Sequence Logos of SDR Elements

   Suppl. Fig. 10: Palindromic sequences in the genome of Nostoc punctiforme

   Suppl. Fig. 11: Selected PU elements in Escherichia coli

   Suppl. Fig. 12: Intergenomic comparisons of sequences carrying SDR

 

Raw Data (in process)

   SDR1   SDR2a   SDR2b   SDR3   SDR4   SDR5   SDR6   SDR7   SDR8