BLASTN 2.2.4 [Aug-26-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= PCR Product DG47 (190 letters)
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS, or phase 0, 1 or 2 HTGS sequences) 1,388,156 sequences; 6,597,081,089 total letters
If you have any problems or questions with the results of this search please refer to the BLAST FAQs
Taxonomy reports
Score E Sequences producing significant alignments: (bits) Value gi|19774485|gb|AC116310.2| Homo sapiens chromosome 5 clone ... 42 0.23 gi|18376852|gb|AC108173.1| Homo sapiens chromosome 5 clone ... 42 0.23 gi|16303531|gb|AC068273.5| Homo sapiens BAC clone RP11-89O1... 42 0.23 gi|15808550|gb|AC093289.2| Homo sapiens chromosome 5 clone ... 42 0.23 gi|12007312|gb|AF310893.1|AF310893 Dictyostelium discoideum... 42 0.23 gi|20377026|gb|AC092713.2| Homo sapiens chromosome 17, clon... 40 0.92 gi|15144479|gb|AC010985.8| Homo sapiens BAC clone RP11-521O... 40 0.92 gi|3980478|gb|AC006083.1|AC006083 Homo sapiens chromosome 1... 40 0.92 gi|14272259|emb|AL353592.9|AL353592 Human DNA sequence from... 40 0.92 gi|13620367|emb|AL356118.15|AL356118 Human DNA sequence fro... 40 0.92 gi|22038648|gb|AC115990.5| Homo sapiens chromosome 11, clon... 38 3.6 gi|21700550|gb|AC115618.2| Homo sapiens chromosome X clone ... 38 3.6 gi|22004186|gb|AC125387.2| Homo sapiens chromosome 19 clone... 38 3.6 gi|9653124|gb|AC010526.7| Homo sapiens chromosome 19 clone ... 38 3.6 gi|21699193|gb|AC079075.6| Homo sapiens chromosome 15, clon... 38 3.6 gi|21321882|gb|AC002075.2| Homo sapiens BAC clone GS1-274A7... 38 3.6 gi|21281332|gb|AC093122.12| Homo sapiens 12 BAC RP11-317E2 ... 38 3.6 gi|9558559|gb|AC008180.15| Homo sapiens 3 BAC RP11-292L5 (R... 38 3.6 gi|21206233|gb|AC012614.8| Homo sapiens chromosome 5 clone ... 38 3.6 gi|21070653|gb|AC010307.7| Homo sapiens chromosome 5 clone ... 38 3.6 gi|20901842|gb|AC024073.6| Homo sapiens chromosome 10 clone... 38 3.6 gi|20845704|ref|XM_137966.1| Mus musculus similar to potass... 38 3.6 gi|17402823|gb|U21324.3| Caenorhabditis elegans cosmid C35D... 38 3.6 gi|19774351|gb|AC027671.9| Homo sapiens chromosome 10 clone... 38 3.6 gi|19807912|gb|AC062028.6| Homo sapiens BAC clone RP11-345J... 38 3.6 gi|19747143|gb|AC091965.2| Homo sapiens chromosome 5 clone ... 38 3.6 gi|19747136|gb|AC091824.3| Homo sapiens chromosome 5 clone ... 38 3.6 gi|19697475|gb|AC099674.2| Homo sapiens chromosome 1 clone ... 38 3.6 gi|19697457|gb|AC104184.2| Homo sapiens chromosome 3 clone ... 38 3.6 gi|19111785|gb|AC060809.7| Homo sapiens chromosome 15, clon... 38 3.6 gi|18542972|gb|AC026408.4| Homo sapiens chromosome 5 clone ... 38 3.6 gi|15145603|gb|AC020556.7| Homo sapiens BAC clone RP11-507B... 38 3.6 gi|14589672|gb|AC023271.11| Homo sapiens BAC clone RP11-96E... 38 3.6 gi|17552503|ref|NM_065617.1| Caenorhabditis elegans 38 3.6 gi|17223365|gb|AC023034.9| Homo sapiens, clone RP11-499F3, ... 38 3.6 gi|15451699|gb|AC027328.4| Homo sapiens chromosome 5 clone ... 38 3.6 gi|13129518|gb|AC090520.1|AC090520 Homo sapiens chromosome ... 38 3.6 gi|9624150|gb|AF270240.1|AF270240 Staphylococcus epidermidi... 38 3.6 gi|4309817|gb|AC006315.2|AC006315 Homo sapiens PAC clone RP... 38 3.6 gi|3406052|gb|AC005017.1|AC005017 Homo sapiens BAC clone GS... 38 3.6 gi|6289073|gb|AF196969.1|AF196969 Homo sapiens phenylalkyla... 38 3.6 gi|21627929|emb|AL669898.17| Mouse DNA sequence from clone ... 38 3.6 gi|21531486|emb|AL731814.13| Mouse DNA sequence from clone ... 38 3.6 gi|21211628|emb|AL137845.9| Human DNA sequence from clone R... 38 3.6 gi|17381348|emb|AL513170.16|AL513170 Human DNA sequence fro... 38 3.6 gi|17065906|emb|AL022150.2|HS198G23 Human DNA sequence from... 38 3.6 gi|16516838|emb|AL138963.20|AL138963 Human DNA sequence fro... 38 3.6 gi|3873300|gb|AC005829.1|AC005829 Homo sapiens chromosome 1... 38 3.6 gi|15384807|emb|AL365366.20|AL365366 Human DNA sequence fro... 38 3.6 gi|3172155|gb|AC004783.1|AC004783 Homo sapiens chromosome 1... 38 3.6 gi|14041763|emb|AL589655.5|AL589655 Human DNA sequence from... 38 3.6 gi|8217877|emb|AL132633.2|CNS01DT3 Human chromosome 14 DNA ... 38 3.6 gi|13443292|emb|AL138742.24|AL138742 Human DNA sequence fro... 38 3.6 gi|11191739|emb|AL050317.16|HSDJ94E24 Human DNA sequence fr... 38 3.6 gi|10862836|emb|AL096677.21|HSJ322G13 Human DNA sequence fr... 38 3.6 gi|7228105|emb|AL031658.11|HS310O13 Human DNA sequence from... 38 3.6 gi|11022629|emb|AL359173.15|AL359173 Human DNA sequence fro... 38 3.6 gi|9930788|emb|AL133480.9|AL133480 Human DNA sequence from ... 38 3.6 gi|4490655|emb|AL035675.1|SPBC1289 S.pombe chromosome II co... 38 3.6 gi|16751499|dbj|AP003083.2| Homo sapiens genomic DNA, chrom... 38 3.6 gi|13517206|dbj|AP002982.2|AP002982 Homo sapiens genomic DN... 38 3.6
>gi|19774485|gb|AC116310.2| Homo sapiens chromosome 5 clone RP11-203E6, complete sequence Length = 149704 Score = 42.1 bits (21), Expect = 0.23 Identities = 30/33 (90%) Strand = Plus / Minus Query: 105 cgatttagtagattccacagataatacaaaaat 137 ||||||||| ||||||||||||| | ||||||| Sbjct: 89808 cgatttagttgattccacagatatttcaaaaat 89776
>gi|18376852|gb|AC108173.1| Homo sapiens chromosome 5 clone RP11-526L22, complete sequence Length = 174346 Score = 42.1 bits (21), Expect = 0.23 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 tccacagataatacaaaaatt 138 ||||||||||||||||||||| Sbjct: 116462 tccacagataatacaaaaatt 116442
>gi|16303531|gb|AC068273.5| Homo sapiens BAC clone RP11-89O10 from 2, complete sequence Length = 181016 Score = 42.1 bits (21), Expect = 0.23 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 ataatacaaaaattaatcgag 145 ||||||||||||||||||||| Sbjct: 41328 ataatacaaaaattaatcgag 41348
>gi|15808550|gb|AC093289.2| Homo sapiens chromosome 5 clone RP11-473L15, complete sequence Length = 159956 Score = 42.1 bits (21), Expect = 0.23 Identities = 30/33 (90%) Strand = Plus / Plus Query: 105 cgatttagtagattccacagataatacaaaaat 137 ||||||||| ||||||||||||| | ||||||| Sbjct: 145352 cgatttagttgattccacagatatttcaaaaat 145384
>gi|12007312|gb|AF310893.1|AF310893 Dictyostelium discoideum RacG (racG) gene, complete cds; and unknown genes Length = 2914 Score = 42.1 bits (21), Expect = 0.23 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 acagataatacaaaaattaat 141 ||||||||||||||||||||| Sbjct: 220 acagataatacaaaaattaat 240
>gi|20377026|gb|AC092713.2| Homo sapiens chromosome 17, clone CTC-780D20, complete sequence Length = 142087 Score = 40.1 bits (20), Expect = 0.92 Identities = 23/24 (95%) Strand = Plus / Minus Query: 62 atgaaaacatgaatataaataact 85 ||||||||| |||||||||||||| Sbjct: 107555 atgaaaacaagaatataaataact 107532
>gi|15144479|gb|AC010985.8| Homo sapiens BAC clone RP11-521O14 from 2, complete sequence Length = 196020 Score = 40.1 bits (20), Expect = 0.92 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 agataatacaaaaattaatc 142 |||||||||||||||||||| Sbjct: 116558 agataatacaaaaattaatc 116577
>gi|3980478|gb|AC006083.1|AC006083 Homo sapiens chromosome 17, clone hRPK.1053_B_8, complete sequence Length = 162625 Score = 40.1 bits (20), Expect = 0.92 Identities = 23/24 (95%) Strand = Plus / Plus Query: 62 atgaaaacatgaatataaataact 85 ||||||||| |||||||||||||| Sbjct: 158656 atgaaaacaagaatataaataact 158679
>gi|14272259|emb|AL353592.9|AL353592 Human DNA sequence from clone RP11-569O12 on chromosome 13, complete sequence [Homo sapiens] Length = 63325 Score = 40.1 bits (20), Expect = 0.92 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 tgtataataaaatatatctg 60 |||||||||||||||||||| Sbjct: 10707 tgtataataaaatatatctg 10688
>gi|13620367|emb|AL356118.15|AL356118 Human DNA sequence from clone RP11-487A2 on chromosome 13, complete sequence [Homo sapiens] Length = 166245 Score = 40.1 bits (20), Expect = 0.92 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 aaaatatatctgtatgaaaa 68 |||||||||||||||||||| Sbjct: 21937 aaaatatatctgtatgaaaa 21918
>gi|22038648|gb|AC115990.5| Homo sapiens chromosome 11, clone CTC-830E23, complete sequence Length = 160860 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 118 tccacagataatacaaaaa 136 ||||||||||||||||||| Sbjct: 80949 tccacagataatacaaaaa 80967
>gi|21700550|gb|AC115618.2| Homo sapiens chromosome X clone RP11-1148L6 map Xp11.23, complete sequence Length = 158454 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 127 aatacaaaaattaatcgag 145 ||||||||||||||||||| Sbjct: 19448 aatacaaaaattaatcgag 19466
>gi|22004186|gb|AC125387.2| Homo sapiens chromosome 19 clone CTD-3056C15, complete sequence Length = 142667 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 121 acagataatacaaaaatta 139 ||||||||||||||||||| Sbjct: 2399 acagataatacaaaaatta 2417
>gi|9653124|gb|AC010526.7| Homo sapiens chromosome 19 clone LLNLR-301A8, complete sequence Length = 37486 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 121 acagataatacaaaaatta 139 ||||||||||||||||||| Sbjct: 602 acagataatacaaaaatta 584
>gi|21699193|gb|AC079075.6| Homo sapiens chromosome 15, clone RP11-300G22, complete sequence Length = 209955 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 117 ttccacagataatacaaaaatta 139 |||||||||||||| |||||||| Sbjct: 58812 ttccacagataataaaaaaatta 58834
>gi|21321882|gb|AC002075.2| Homo sapiens BAC clone GS1-274A7 from 7q31, complete sequence Length = 120030 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 40 ttgtataataaaatatatc 58 ||||||||||||||||||| Sbjct: 39895 ttgtataataaaatatatc 39913
>gi|21281332|gb|AC093122.12| Homo sapiens 12 BAC RP11-317E2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 108125 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 50 aaatatatctgtatgaaaa 68 ||||||||||||||||||| Sbjct: 49261 aaatatatctgtatgaaaa 49243
>gi|9558559|gb|AC008180.15| Homo sapiens 3 BAC RP11-292L5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 193035 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 atgaatataaataacttaa 88 ||||||||||||||||||| Sbjct: 142347 atgaatataaataacttaa 142365
>gi|21206233|gb|AC012614.8| Homo sapiens chromosome 5 clone CTB-30K1, complete sequence Length = 128501 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 58 ctgtatgaaaacatgaata 76 ||||||||||||||||||| Sbjct: 2582 ctgtatgaaaacatgaata 2600
>gi|21070653|gb|AC010307.7| Homo sapiens chromosome 5 clone CTB-49A3, complete sequence Length = 198410 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 58 ctgtatgaaaacatgaata 76 ||||||||||||||||||| Sbjct: 185962 ctgtatgaaaacatgaata 185980
>gi|20901842|gb|AC024073.6| Homo sapiens chromosome 10 clone RP11-394D15, complete sequence Length = 174230 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 63 tgaaaacatgaatataaat 81 ||||||||||||||||||| Sbjct: 13744 tgaaaacatgaatataaat 13726
>gi|20845704|ref|XM_137966.1| Mus musculus similar to potassium channel, alpha subunit (LOC238076), mRNA Length = 1811 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 114 agattccacagataataca 132 ||||||||||||||||||| Sbjct: 1521 agattccacagataataca 1503
>gi|17402823|gb|U21324.3| Caenorhabditis elegans cosmid C35D10, complete sequence Length = 36882 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 102 tgccgatttagtagattcc 120 ||||||||||||||||||| Sbjct: 21314 tgccgatttagtagattcc 21296
>gi|19774351|gb|AC027671.9| Homo sapiens chromosome 10 clone RP11-183F21, complete sequence Length = 152867 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 63 tgaaaacatgaatataaat 81 ||||||||||||||||||| Sbjct: 113782 tgaaaacatgaatataaat 113764
>gi|19807912|gb|AC062028.6| Homo sapiens BAC clone RP11-345J13 from 2, complete sequence Length = 59634 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 127 aatacaaaaattaatcgag 145 ||||||||||||||||||| Sbjct: 5556 aatacaaaaattaatcgag 5538
>gi|19747143|gb|AC091965.2| Homo sapiens chromosome 5 clone RP11-480D4, complete sequence Length = 163656 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 171 tttcaaatacagtatttct 189 ||||||||||||||||||| Sbjct: 148844 tttcaaatacagtatttct 148826
>gi|19747136|gb|AC091824.3| Homo sapiens chromosome 5 clone CTC-455O22, complete sequence Length = 171962 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 39 gttgtataataaaatatat 57 ||||||||||||||||||| Sbjct: 14365 gttgtataataaaatatat 14383
>gi|19697475|gb|AC099674.2| Homo sapiens chromosome 1 clone RP11-143H12, complete sequence Length = 181928 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 120 cacagataatacaaaaatt 138 ||||||||||||||||||| Sbjct: 100894 cacagataatacaaaaatt 100876
>gi|19697457|gb|AC104184.2| Homo sapiens chromosome 3 clone RP11-188P20, complete sequence Length = 143034 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 45 taataaaatatatctgtat 63 ||||||||||||||||||| Sbjct: 14419 taataaaatatatctgtat 14437
>gi|19111785|gb|AC060809.7| Homo sapiens chromosome 15, clone RP11-404B13, complete sequence Length = 172123 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 121 acagataatacaaaaatta 139 ||||||||||||||||||| Sbjct: 47151 acagataatacaaaaatta 47169
>gi|18542972|gb|AC026408.4| Homo sapiens chromosome 5 clone CTC-424O20, complete sequence Length = 72675 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 39 gttgtataataaaatatat 57 ||||||||||||||||||| Sbjct: 21547 gttgtataataaaatatat 21565
>gi|15145603|gb|AC020556.7| Homo sapiens BAC clone RP11-507B10 from 4, complete sequence Length = 186092 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 atgaatataaataacttaa 88 ||||||||||||||||||| Sbjct: 30643 atgaatataaataacttaa 30661
>gi|14589672|gb|AC023271.11| Homo sapiens BAC clone RP11-96E8 from 2, complete sequence Length = 106499 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 121 acagataatacaaaaatta 139 ||||||||||||||||||| Sbjct: 16118 acagataatacaaaaatta 16136
>gi|17552503|ref|NM_065617.1| Caenorhabditis elegans Length = 1098 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 102 tgccgatttagtagattcc 120 ||||||||||||||||||| Sbjct: 987 tgccgatttagtagattcc 1005
>gi|17223365|gb|AC023034.9| Homo sapiens, clone RP11-499F3, complete sequence Length = 189732 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 121 acagataatacaaaaatta 139 ||||||||||||||||||| Sbjct: 127434 acagataatacaaaaatta 127452
>gi|15451699|gb|AC027328.4| Homo sapiens chromosome 5 clone CTD-2136J7, complete sequence Length = 88303 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 171 tttcaaatacagtatttct 189 ||||||||||||||||||| Sbjct: 20853 tttcaaatacagtatttct 20835
>gi|13129518|gb|AC090520.1|AC090520 Homo sapiens chromosome 7 clone RP11-150M13, complete sequence Length = 18011 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 121 acagataatacaaaaatta 139 ||||||||||||||||||| Sbjct: 15045 acagataatacaaaaatta 15063
>gi|9624150|gb|AF270240.1|AF270240 Staphylococcus epidermidis strain SR1 clone step.1056a01 genomic sequence Length = 3543 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 50 aaatatatctgtatgaaaa 68 ||||||||||||||||||| Sbjct: 1011 aaatatatctgtatgaaaa 1029
>gi|4309817|gb|AC006315.2|AC006315 Homo sapiens PAC clone RP4-630F1 from 7q33-q35, complete sequence Length = 127526 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 127 aatacaaaaattaatcgag 145 ||||||||||||||||||| Sbjct: 113856 aatacaaaaattaatcgag 113874
>gi|3406052|gb|AC005017.1|AC005017 Homo sapiens BAC clone GS1-214N13 from 7p14-p15, complete sequence Length = 137176 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 44 ataataaaatatatctgta 62 ||||||||||||||||||| Sbjct: 68736 ataataaaatatatctgta 68754
>gi|6289073|gb|AF196969.1|AF196969 Homo sapiens phenylalkylamine binding protein gene, complete cds; MG81 protein gene, partial cds; putative RNA-binding protein 3 RNPL gene, complete cds; and MG21 pseudogene, complete sequence Length = 113929 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 127 aatacaaaaattaatcgag 145 ||||||||||||||||||| Sbjct: 59811 aatacaaaaattaatcgag 59829
>gi|21627929|emb|AL669898.17| Mouse DNA sequence from clone RP23-6C3 on chromosome X, complete sequence [Mus musculus] Length = 220201 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 49 aaaatatatctgtatgaaaacat 71 ||||||||| ||||||||||||| Sbjct: 12630 aaaatatatttgtatgaaaacat 12608
>gi|21531486|emb|AL731814.13| Mouse DNA sequence from clone RP23-109J20 on chromosome 2, complete sequence [Mus musculus] Length = 210821 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 41 tgtataataaaatatatctgtat 63 |||||| |||||||||||||||| Sbjct: 129595 tgtatactaaaatatatctgtat 129617
>gi|21211628|emb|AL137845.9| Human DNA sequence from clone RP5-961K14 on chromosome X, complete sequence [Homo sapiens] Length = 116457 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 127 aatacaaaaattaatcgag 145 ||||||||||||||||||| Sbjct: 115813 aatacaaaaattaatcgag 115795
>gi|17381348|emb|AL513170.16|AL513170 Human DNA sequence from clone RP11-285B4 on chromosome 1, complete sequence [Homo sapiens] Length = 96748 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 60 gtatgaaaacatgaatata 78 ||||||||||||||||||| Sbjct: 80885 gtatgaaaacatgaatata 80903
>gi|17065906|emb|AL022150.2|HS198G23 Human DNA sequence from clone RP1-198G23 on chromosome Xq21.1-21.33, complete sequence [Homo sapiens] Length = 94886 Score = 38.2 bits (19), Expect = 3.6 Identities = 25/27 (92%) Strand = Plus / Plus Query: 42 gtataataaaatatatctgtatgaaaa 68 |||||||||||||||| ||||| |||| Sbjct: 57663 gtataataaaatatatatgtattaaaa 57689
>gi|16516838|emb|AL138963.20|AL138963 Human DNA sequence from clone RP11-290D2 on chromosome 13, complete sequence [Homo sapiens] Length = 161297 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 50 aaatatatctgtatgaaaa 68 ||||||||||||||||||| Sbjct: 74469 aaatatatctgtatgaaaa 74487
>gi|3873300|gb|AC005829.1|AC005829 Homo sapiens chromosome 17, clone hRPK.259_G_18, complete sequence Length = 170030 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 127 aatacaaaaattaatcgag 145 ||||||||||||||||||| Sbjct: 166202 aatacaaaaattaatcgag 166184
>gi|15384807|emb|AL365366.20|AL365366 Human DNA sequence from clone RP11-553N16 on chromosome 1, complete sequence [Homo sapiens] Length = 143967 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 40 ttgtataataaaatatatc 58 ||||||||||||||||||| Sbjct: 115042 ttgtataataaaatatatc 115024
>gi|3172155|gb|AC004783.1|AC004783 Homo sapiens chromosome 1, BAC CIT-HSP-292g8 (BC262482), complete sequence Length = 96654 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 40 ttgtataataaaatatatc 58 ||||||||||||||||||| Sbjct: 19970 ttgtataataaaatatatc 19988
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS, or phase 0, 1 or 2 HTGS sequences) Posted date: Sep 18, 2002 1:15 AM Number of letters in database: 1,073,645,643 Number of sequences in database: 384,598 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,326,487 Number of Sequences: 1388156 Number of extensions: 1326487 Number of successful extensions: 395470 Number of sequences better than 10.0: 61 length of query: 190 length of database: 6,597,081,089 effective HSP length: 20 effective length of query: 170 effective length of database: 6,569,317,969 effective search space: 1116784054730 effective search space used: 1116784054730 T: 0 A: 30 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
